Transcriptome–proteome compendium of the Antarctic krill (Euphausia superba): Metabolic potential and repertoire of hydrolytic enzymes
Abstract: The Antarctic krill (Euphausia superba Dana) is a keystone species in the Southern Ocean that uses an arsenal of hydrolases for biomacromolecule decomposition to effectively digest its omnivorous diet. The present study builds on a hybrid‐assembled transcriptome (13,671 ORFs) combined with comprehensive proteome profiling. The analysis of individual krill compartments allowed detection of significantly more different proteins compared to that of the entire animal (1464 vs. 294 proteins). The nearby krill sampling stations in the Bransfield Strait (Antarctic Peninsula) yielded rather uniform proteome datasets. Proteins related to energy production and lipid degradation were particularly abundant in the abdomen, agreeing with the high energy demand of muscle tissue. A total of 378 different biomacromolecule hydrolysing enzymes were detected, including 250 proteases, 99 CAZymes, 14 nucleases and 15 lipases. The large repertoire in proteases is in accord with the protein‐rich diet affiliated with E. superba’s omnivorous lifestyle and complex biology. The richness in chitin‐degrading enzymes allows not only digestion of zooplankton diet, but also the utilisation of the discharged exoskeleton after moulting.
- Location
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Deutsche Nationalbibliothek Frankfurt am Main
- Extent
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Online-Ressource
- Language
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Englisch
- Bibliographic citation
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Transcriptome–proteome compendium of the Antarctic krill (Euphausia superba): Metabolic potential and repertoire of hydrolytic enzymes ; day:26 ; month:07 ; year:2022 ; extent:15
Proteomics ; (26.07.2022) (gesamt 15)
- Creator
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Möller, Lars
Vainstein, Yeheven
Wöhlbrand, Lars
Dörries, Marvin
Meyer, Bettina
Sohn, Kai
Rabus, Ralf
- DOI
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10.1002/pmic.202100404
- URN
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urn:nbn:de:101:1-2022072615162794707804
- Rights
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Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.
- Last update
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21.12.0013, 8:06 AM CET
Data provider
Deutsche Nationalbibliothek. If you have any questions about the object, please contact the data provider.
Associated
- Möller, Lars
- Vainstein, Yeheven
- Wöhlbrand, Lars
- Dörries, Marvin
- Meyer, Bettina
- Sohn, Kai
- Rabus, Ralf
Other Objects (12)
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Sex identification from distinctive gene expression patterns in Antarctic krill (Euphausia superba)
Differential gene expression during the moult cycle of Antarctic krill (Euphausia superba)
Hydrodynamics of the fast-start caridoid escape response in Antarctic krill, Euphausia superba
Transcriptome analysis reveals genes connected to temperature adaptation in juvenile antarctic krill Euphausia superba
Die Verarbeitung von Krill (Euphausia superba Dana) zu Lebensmitteln : = Processing of krill (Euphausia superba Dana) into food
Estimating the average distribution of Antarctic krill Euphausia superba at the northern Antarctic Peninsula during austral summer and winter
Systematic sequencing of mRNA from the Antarctic krill (Euphausia superba) and first tissue specific transcriptional signature
An intercomparison of models predicting growth of Antarctic krill (Euphausia superba) : The importance of recognizing model specificity
Characterization of polymorphic microsatellite loci in the Antarctic krill Euphausia superba
The overwintering of Antarctic krill, Euphausia superba, from an ecophysiological perspective
Antarctic krill (Euphausia superba) exhibit positive phototaxis to white LED light
Advancing individual-based models of Antarctic krill (Euphausia superba, Dana 1850)
Sex identification from distinctive gene expression patterns in Antarctic krill (Euphausia superba)
Differential gene expression during the moult cycle of Antarctic krill (Euphausia superba)
Hydrodynamics of the fast-start caridoid escape response in Antarctic krill, Euphausia superba
Transcriptome analysis reveals genes connected to temperature adaptation in juvenile antarctic krill Euphausia superba
Die Verarbeitung von Krill (Euphausia superba Dana) zu Lebensmitteln : = Processing of krill (Euphausia superba Dana) into food
Estimating the average distribution of Antarctic krill Euphausia superba at the northern Antarctic Peninsula during austral summer and winter
Systematic sequencing of mRNA from the Antarctic krill (Euphausia superba) and first tissue specific transcriptional signature
An intercomparison of models predicting growth of Antarctic krill (Euphausia superba) : The importance of recognizing model specificity
Characterization of polymorphic microsatellite loci in the Antarctic krill Euphausia superba
The overwintering of Antarctic krill, Euphausia superba, from an ecophysiological perspective
Antarctic krill (Euphausia superba) exhibit positive phototaxis to white LED light
Advancing individual-based models of Antarctic krill (Euphausia superba, Dana 1850)
Sex identification from distinctive gene expression patterns in Antarctic krill (Euphausia superba)
Differential gene expression during the moult cycle of Antarctic krill (Euphausia superba)
Hydrodynamics of the fast-start caridoid escape response in Antarctic krill, Euphausia superba
Transcriptome analysis reveals genes connected to temperature adaptation in juvenile antarctic krill Euphausia superba
Die Verarbeitung von Krill (Euphausia superba Dana) zu Lebensmitteln : = Processing of krill (Euphausia superba Dana) into food
Estimating the average distribution of Antarctic krill Euphausia superba at the northern Antarctic Peninsula during austral summer and winter
Systematic sequencing of mRNA from the Antarctic krill (Euphausia superba) and first tissue specific transcriptional signature