spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2105

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data ; volume:15 ; number:1 ; day:23 ; month:3 ; year:2014 ; pages:1-7 ; date:12.2014
BMC bioinformatics ; 15, Heft 1 (23.3.2014), 1-7, 12.2014

Creator: Vitting-Seerup, Kristoffer

Contributor: Porse, Bo Torben
Sandelin, Albin
Waage, Johannes
SpringerLink (Online service)

DOI: 10.1186/1471-2105-15-81

URN: urn:nbn:de:1111-2016021744970

Rights: Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 15.08.2025, 7:20 AM CEST

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Vitting-Seerup, Kristoffer
Porse, Bo Torben
Sandelin, Albin
Waage, Johannes
SpringerLink (Online service)

Other Objects (12)

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data

RNA splicing analysis using heterogeneous and large RNA-seq datasets

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Detection of aberrant splicing events in RNA-seq data using FRASER

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Genome-wide Determination Of Splicing Efficiency And Dynamics From RNA-Seq Data

recount3: summaries and queries for large-scale RNA-seq expression and splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data

RNA splicing analysis using heterogeneous and large RNA-seq datasets

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Detection of aberrant splicing events in RNA-seq data using FRASER

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Genome-wide Determination Of Splicing Efficiency And Dynamics From RNA-Seq Data

recount3: summaries and queries for large-scale RNA-seq expression and splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data

RNA splicing analysis using heterogeneous and large RNA-seq datasets

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Detection of aberrant splicing events in RNA-seq data using FRASER

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Genome-wide Determination Of Splicing Efficiency And Dynamics From RNA-Seq Data

recount3: summaries and queries for large-scale RNA-seq expression and splicing

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spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data

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Other Objects (12)

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data

RNA splicing analysis using heterogeneous and large RNA-seq datasets

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Detection of aberrant splicing events in RNA-seq data using FRASER

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Genome-wide Determination Of Splicing Efficiency And Dynamics From RNA-Seq Data

recount3: summaries and queries for large-scale RNA-seq expression and splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data

RNA splicing analysis using heterogeneous and large RNA-seq datasets

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Detection of aberrant splicing events in RNA-seq data using FRASER

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Genome-wide Determination Of Splicing Efficiency And Dynamics From RNA-Seq Data

recount3: summaries and queries for large-scale RNA-seq expression and splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data

RNA splicing analysis using heterogeneous and large RNA-seq datasets

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Detection of aberrant splicing events in RNA-seq data using FRASER

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Genome-wide Determination Of Splicing Efficiency And Dynamics From RNA-Seq Data

recount3: summaries and queries for large-scale RNA-seq expression and splicing

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