ProcaryaSV: structural variation detection pipeline for bacterial genomes using short-read sequencing
- Location
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Deutsche Nationalbibliothek Frankfurt am Main
- Extent
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1 Online-Ressource.
- Language
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Englisch
- Bibliographic citation
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ProcaryaSV: structural variation detection pipeline for bacterial genomes using short-read sequencing ; volume:25 ; number:1 ; day:9 ; month:7 ; year:2024 ; pages:1-13 ; date:12.2024
BMC bioinformatics ; 25, Heft 1 (9.7.2024), 1-13, 12.2024
- Creator
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Jugas, Robin
Vitkova, Helena
- Contributor
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SpringerLink (Online service)
- DOI
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10.1186/s12859-024-05843-1
- URN
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urn:nbn:de:101:1-2409262141069.551117402859
- Rights
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Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.
- Last update
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15.08.2025, 7:38 AM CEST
Data provider
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Associated
- Jugas, Robin
- Vitkova, Helena
- SpringerLink (Online service)
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SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information
Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces
Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools
KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes
HGA: de novo genome assembly method for bacterial genomes using high coverage short sequencing reads
TreeToReads - a pipeline for simulating raw reads from phylogenies
Read-SpaM: assembly-free and alignment-free comparison of bacterial genomes with low sequencing coverage
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