NicE-seq: high resolution open chromatin profiling

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1474-760X

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: NicE-seq: high resolution open chromatin profiling ; volume:18 ; number:1 ; day:28 ; month:6 ; year:2017 ; pages:1-15 ; date:12.2017
Genome biology ; 18, Heft 1 (28.6.2017), 1-15, 12.2017

Classification: Biowissenschaften, Biologie

Creator: Ponnaluri, V. K. Chaithanya

Contributor: Zhang, Guoqiang
Estève, Pierre-Olivier
Spracklin, George
Sian, Stephanie
Xu, Shuang-yong
Benoukraf, Touati
Pradhan, Sriharsa
SpringerLink (Online service)

DOI: 10.1186/s13059-017-1247-6

URN: urn:nbn:de:1111-201709223481

Rights: Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 15.08.2025, 7:21 AM CEST

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Ponnaluri, V. K. Chaithanya
Zhang, Guoqiang
Estève, Pierre-Olivier
Spracklin, George
Sian, Stephanie
Xu, Shuang-yong
Benoukraf, Touati
Pradhan, Sriharsa
SpringerLink (Online service)

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Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Characterization of cis-regulatory elements via open chromatin profiling

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

scPCOR-seq enables co-profiling of chromatin occupancy and RNAs in single cells

Solid-phase capture and profiling of open chromatin by spatial ATAC

Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

One-pot universal NicE-seq: all enzymatic downstream processing of 4% formaldehyde crosslinked cells for chromatin accessibility genomics

ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes

Epigenomic profiling of retinal progenitors reveals LHX2 is required for developmental regulation of open chromatin

Optimising gene expression profiling using RNA-seq

Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Characterization of cis-regulatory elements via open chromatin profiling

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

scPCOR-seq enables co-profiling of chromatin occupancy and RNAs in single cells

Solid-phase capture and profiling of open chromatin by spatial ATAC

Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

One-pot universal NicE-seq: all enzymatic downstream processing of 4% formaldehyde crosslinked cells for chromatin accessibility genomics

ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes

Epigenomic profiling of retinal progenitors reveals LHX2 is required for developmental regulation of open chromatin

Optimising gene expression profiling using RNA-seq

Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Characterization of cis-regulatory elements via open chromatin profiling

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

scPCOR-seq enables co-profiling of chromatin occupancy and RNAs in single cells

Solid-phase capture and profiling of open chromatin by spatial ATAC

Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

One-pot universal NicE-seq: all enzymatic downstream processing of 4% formaldehyde crosslinked cells for chromatin accessibility genomics

ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes

Epigenomic profiling of retinal progenitors reveals LHX2 is required for developmental regulation of open chromatin

Optimising gene expression profiling using RNA-seq

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NicE-seq: high resolution open chromatin profiling

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Other Objects (12)

Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Characterization of cis-regulatory elements via open chromatin profiling

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

scPCOR-seq enables co-profiling of chromatin occupancy and RNAs in single cells

Solid-phase capture and profiling of open chromatin by spatial ATAC

Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

One-pot universal NicE-seq: all enzymatic downstream processing of 4% formaldehyde crosslinked cells for chromatin accessibility genomics

ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes

Epigenomic profiling of retinal progenitors reveals LHX2 is required for developmental regulation of open chromatin

Optimising gene expression profiling using RNA-seq

Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Characterization of cis-regulatory elements via open chromatin profiling

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

scPCOR-seq enables co-profiling of chromatin occupancy and RNAs in single cells

Solid-phase capture and profiling of open chromatin by spatial ATAC

Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

One-pot universal NicE-seq: all enzymatic downstream processing of 4% formaldehyde crosslinked cells for chromatin accessibility genomics

ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes

Epigenomic profiling of retinal progenitors reveals LHX2 is required for developmental regulation of open chromatin

Optimising gene expression profiling using RNA-seq

Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Characterization of cis-regulatory elements via open chromatin profiling

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

scPCOR-seq enables co-profiling of chromatin occupancy and RNAs in single cells

Solid-phase capture and profiling of open chromatin by spatial ATAC

Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

One-pot universal NicE-seq: all enzymatic downstream processing of 4% formaldehyde crosslinked cells for chromatin accessibility genomics

ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes

Epigenomic profiling of retinal progenitors reveals LHX2 is required for developmental regulation of open chromatin

Optimising gene expression profiling using RNA-seq

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