ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2164

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis ; volume:12 ; number:1 ; day:28 ; month:2 ; year:2011 ; pages:1-12 ; date:12.2011
BMC genomics ; 12, Heft 1 (28.2.2011), 1-12, 12.2011

Creator: Ho, Joshua WK

Contributor: Bishop, Eric
Karchenko, Peter V.
Nègre, Nicolas
White, Kevin P.
Park, Peter J.
SpringerLink (Online service)

DOI: 10.1186/1471-2164-12-134

URN: urn:nbn:de:1111-2016072830200

Rights: Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 14.08.2025, 10:50 AM CEST

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Ho, Joshua WK
Bishop, Eric
Karchenko, Peter V.
Nègre, Nicolas
White, Kevin P.
Park, Peter J.
SpringerLink (Online service)

Other Objects (12)

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

ChIPseqR: analysis of ChIP-seq experiments

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Normalization of ChIP-seq data with control

Shape-based peak identification for ChIP-Seq

Model-based Analysis of ChIP-Seq (MACS)

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene ranking

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

ChIPseqR: analysis of ChIP-seq experiments

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Normalization of ChIP-seq data with control

Shape-based peak identification for ChIP-Seq

Model-based Analysis of ChIP-Seq (MACS)

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene ranking

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

ChIPseqR: analysis of ChIP-seq experiments

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Normalization of ChIP-seq data with control

Shape-based peak identification for ChIP-Seq

Model-based Analysis of ChIP-Seq (MACS)

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene ranking

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

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ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

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Other Objects (12)

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

ChIPseqR: analysis of ChIP-seq experiments

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Normalization of ChIP-seq data with control

Shape-based peak identification for ChIP-Seq

Model-based Analysis of ChIP-Seq (MACS)

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene ranking

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

ChIPseqR: analysis of ChIP-seq experiments

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Normalization of ChIP-seq data with control

Shape-based peak identification for ChIP-Seq

Model-based Analysis of ChIP-Seq (MACS)

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene ranking

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

ChIPseqR: analysis of ChIP-seq experiments

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Normalization of ChIP-seq data with control

Shape-based peak identification for ChIP-Seq

Model-based Analysis of ChIP-Seq (MACS)

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene ranking

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

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