HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2105

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data ; volume:15 ; number:1 ; day:15 ; month:8 ; year:2014 ; pages:1-12 ; date:12.2014
BMC bioinformatics ; 15, Heft 1 (15.8.2014), 1-12, 12.2014

Creator: Yan, Huihuang

Contributor: Evans, Jared
Kalmbach, Mike
Moore, Raymond
Middha, Sumit
Luban, Stanislav
Wang, Liguo
Bhagwate, Aditya
Li, Ying
Sun, Zhifu
Chen, Xianfeng
Kocher, Jean-Pierre A.
SpringerLink (Online service)

DOI: 10.1186/1471-2105-15-280

URN: urn:nbn:de:1111-2016021747921

Rights: Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 15.08.2025, 7:26 AM CEST

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Associated

Yan, Huihuang
Evans, Jared
Kalmbach, Mike
Moore, Raymond
Middha, Sumit
Luban, Stanislav
Wang, Liguo
Bhagwate, Aditya
Li, Ying
Sun, Zhifu
Chen, Xianfeng
Kocher, Jean-Pierre A.
SpringerLink (Online service)

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RELACS nuclei barcoding enables high-throughput ChIP-seq

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

ChIPseqR: analysis of ChIP-seq experiments

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

Model-based Analysis of ChIP-Seq (MACS)

Shape-based peak identification for ChIP-Seq

Normalization of ChIP-seq data with control

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data

RELACS nuclei barcoding enables high-throughput ChIP-seq

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

ChIPseqR: analysis of ChIP-seq experiments

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

Model-based Analysis of ChIP-Seq (MACS)

Shape-based peak identification for ChIP-Seq

Normalization of ChIP-seq data with control

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data

RELACS nuclei barcoding enables high-throughput ChIP-seq

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

ChIPseqR: analysis of ChIP-seq experiments

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

Model-based Analysis of ChIP-Seq (MACS)

Shape-based peak identification for ChIP-Seq

Normalization of ChIP-seq data with control

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data

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HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

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Other Objects (12)

RELACS nuclei barcoding enables high-throughput ChIP-seq

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

ChIPseqR: analysis of ChIP-seq experiments

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

Model-based Analysis of ChIP-Seq (MACS)

Shape-based peak identification for ChIP-Seq

Normalization of ChIP-seq data with control

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data

RELACS nuclei barcoding enables high-throughput ChIP-seq

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

ChIPseqR: analysis of ChIP-seq experiments

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

Model-based Analysis of ChIP-Seq (MACS)

Shape-based peak identification for ChIP-Seq

Normalization of ChIP-seq data with control

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data

RELACS nuclei barcoding enables high-throughput ChIP-seq

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

ChIPseqR: analysis of ChIP-seq experiments

Robust algorithms for improved reproducible ChIP-seq and ChIP-nexus peak calling

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data

Model-based Analysis of ChIP-Seq (MACS)

Shape-based peak identification for ChIP-Seq

Normalization of ChIP-seq data with control

HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples

Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data

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