Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2164

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data ; volume:19 ; number:10 ; day:31 ; month:12 ; year:2018 ; pages:79-94 ; date:12.2018
BMC genomics ; 19, Heft 10 (31.12.2018), 79-94, 12.2018

Classification: Biowissenschaften, Biologie

Creator: Zhang, Lirong
Xue, Gaogao
Liu, Junjie
Li, Qianzhong
Wang, Yong

Contributor: SpringerLink (Online service)

DOI: 10.1186/s12864-018-5278-5

URN: urn:nbn:de:101:1-2019020808224644707060

Rights: Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 14.08.2025, 10:53 AM CEST

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Zhang, Lirong
Xue, Gaogao
Liu, Junjie
Li, Qianzhong
Wang, Yong
SpringerLink (Online service)

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Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data

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Other Objects (12)

ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps

Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Limitations and possibilities of low cell number ChIP-seq

intePareto: an R package for integrative analyses of RNA-Seq and ChIP-Seq data

Pinpointing transcription factor binding sites from ChIP-seq data with SeqSite

Model-based Analysis of ChIP-Seq (MACS)

Shape-based peak identification for ChIP-Seq

Normalization of ChIP-seq data with control

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ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

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MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps

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intePareto: an R package for integrative analyses of RNA-Seq and ChIP-Seq data

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ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps

Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq

Limitations and possibilities of low cell number ChIP-seq

intePareto: an R package for integrative analyses of RNA-Seq and ChIP-Seq data

Pinpointing transcription factor binding sites from ChIP-seq data with SeqSite

Model-based Analysis of ChIP-Seq (MACS)

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Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster

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