Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance
- Location
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Deutsche Nationalbibliothek Frankfurt am Main
- ISSN
-
1471-2105
- Extent
-
Online-Ressource
- Language
-
Englisch
- Notes
-
online resource.
- Bibliographic citation
-
Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance ; volume:19 ; number:1 ; day:14 ; month:11 ; year:2018 ; pages:1-12 ; date:12.2018
BMC bioinformatics ; 19, Heft 1 (14.11.2018), 1-12, 12.2018
- Classification
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Biowissenschaften, Biologie
- Creator
-
Baccarella, Alyssa
Williams, Claire R.
Parrish, Jay Z.
Kim, Charles C.
- Contributor
-
SpringerLink (Online service)
- DOI
-
10.1186/s12859-018-2445-2
- URN
-
urn:nbn:de:101:1-2018123022051608542992
- Rights
-
Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.
- Last update
-
14.08.2025, 10:44 AM CEST
Data provider
This object is provided by:
Deutsche Nationalbibliothek. If you have any questions about the object, please contact the data provider.
Deutsche Nationalbibliothek. If you have any questions about the object, please contact the data provider.
Associated
- Baccarella, Alyssa
- Williams, Claire R.
- Parrish, Jay Z.
- Kim, Charles C.
- SpringerLink (Online service)
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Trimming of sequence reads alters RNA-Seq gene expression estimates
Ladder-seq partitions RNA-seq reads by length to improve transcriptome quantification and assembly
Accuracy of RNA-Seq and its dependence on sequencing depth
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L-GIREMI uncovers RNA editing sites in long-read RNA-seq
Local sequence and sequencing depth dependent accuracy of RNA-seq reads
HLA typing from RNA-Seq sequence reads
scReadSim: a single-cell RNA-seq and ATAC-seq read simulator
RASflow: an RNA-Seq analysis workflow with Snakemake
CLASS: constrained transcript assembly of RNA-seq reads
A comprehensive workflow for optimizing RNA-seq data analysis
Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing
Trimming of sequence reads alters RNA-Seq gene expression estimates
Ladder-seq partitions RNA-seq reads by length to improve transcriptome quantification and assembly
Accuracy of RNA-Seq and its dependence on sequencing depth
CRAC: an integrated approach to the analysis of RNA-seq reads
L-GIREMI uncovers RNA editing sites in long-read RNA-seq
Local sequence and sequencing depth dependent accuracy of RNA-seq reads
HLA typing from RNA-Seq sequence reads
scReadSim: a single-cell RNA-seq and ATAC-seq read simulator
RASflow: an RNA-Seq analysis workflow with Snakemake
CLASS: constrained transcript assembly of RNA-seq reads
A comprehensive workflow for optimizing RNA-seq data analysis
Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing
Trimming of sequence reads alters RNA-Seq gene expression estimates
Ladder-seq partitions RNA-seq reads by length to improve transcriptome quantification and assembly
Accuracy of RNA-Seq and its dependence on sequencing depth
CRAC: an integrated approach to the analysis of RNA-seq reads