Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

to related objects

Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2164

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach ; volume:19 ; number:1 ; day:27 ; month:12 ; year:2018 ; pages:1-13 ; date:12.2018
BMC genomics ; 19, Heft 1 (27.12.2018), 1-13, 12.2018

Classification: Biowissenschaften, Biologie

Creator: Zhang, Yi
Liu, Xinan
MacLeod, James
Liu, Jinze

Contributor: SpringerLink (Online service)

DOI: 10.1186/s12864-018-5350-1

URN: urn:nbn:de:101:1-2019021416281947353113

Rights: Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 14.08.2025, 10:52 AM CEST

Data provider

This object is provided by:
Deutsche Nationalbibliothek. If you have any questions about the object, please contact the data provider.

Show original at data provider

Associated

Zhang, Yi
Liu, Xinan
MacLeod, James
Liu, Jinze
SpringerLink (Online service)

Other Objects (12)

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Limitations of alignment-free tools in total RNA-seq quantification

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes

HSA: A Heuristic Splice Alignment Tool

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

SeqOthello: querying RNA-seq experiments at scale

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Limitations of alignment-free tools in total RNA-seq quantification

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes

HSA: A Heuristic Splice Alignment Tool

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

SeqOthello: querying RNA-seq experiments at scale

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Limitations of alignment-free tools in total RNA-seq quantification

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes

HSA: A Heuristic Splice Alignment Tool

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

SeqOthello: querying RNA-seq experiments at scale

Cultural heritage institutions wishing to register will find more information here.

Fields marked * need to be filled in.

Username*

Please enter your username

Email*

Please enter your email address

Please do not fill this field

First name

Last name

Password*

Please enter your password

Confirm password*

Please enter the same password

I have read the terms of use and the privacy policy for the collection of personal data and accept them. *

This field is required.

I would like to subscribe to the newsletter of the Deutsche Digitale Bibliothek. See newsletter subscription info.

Account created

Your "My DDB" account has been successfully created. Before you can log in to your account, you must click the confirmation link in the message we just sent to the email address you provided.

Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

Object Details

References and Relationships

Classification and Topics

Contributors, Places and Time

Further information

Data provider

Associated

Other Objects (12)

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Limitations of alignment-free tools in total RNA-seq quantification

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes

HSA: A Heuristic Splice Alignment Tool

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

SeqOthello: querying RNA-seq experiments at scale

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Limitations of alignment-free tools in total RNA-seq quantification

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes

HSA: A Heuristic Splice Alignment Tool

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

SeqOthello: querying RNA-seq experiments at scale

Global and unbiased detection of splice junctions from RNA-seq data

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

Limitations of alignment-free tools in total RNA-seq quantification

MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes

HSA: A Heuristic Splice Alignment Tool

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

SeqOthello: querying RNA-seq experiments at scale

Related objects

Reset password