Single‐cell transcriptomes of murine bone marrow stromal cells reveal niche‐associated heterogeneity

Abstract: Bone marrow (BM) stromal cells are important in the development and maintenance of cells of the immune system. Using single cell RNA sequencing, we here explore the functional and phenotypic heterogeneity of individual transcriptomes of 1167 murine BM mesenchymal stromal cells. These cells exhibit a tremendous heterogeneity of gene expression, which precludes the identification of defined subpopulations. However, according to the expression of 108 genes involved in the communication of stromal cells with hematopoietic cells, we have identified 14 non‐overlapping subpopulations, with distinct cytokine or chemokine gene expression signatures. With respect to the maintenance of subsets of immune memory cells by stromal cells, we identified distinct subpopulations expressing Il7, Il15 and Tnfsf13b. Together, this study provides a comprehensive dissection of the BM stromal heterogeneity at the single cell transcriptome level and provides a basis to understand their lifestyle and their role as organizers of niches for the long‐term maintenance of immune cells.

Standort
Deutsche Nationalbibliothek Frankfurt am Main
Umfang
Online-Ressource
Sprache
Englisch

Erschienen in
Single‐cell transcriptomes of murine bone marrow stromal cells reveal niche‐associated heterogeneity ; volume:49 ; number:9 ; year:2019 ; pages:1372-1379 ; extent:8
European journal of immunology ; 49, Heft 9 (2019), 1372-1379 (gesamt 8)

Urheber
Addo, Richard K.
Heinrich, Frederik
Heinz, Gitta Anne
Schulz, Daniel
Sercan‐Alp, Özen
Lehmann, Katrin
Tran, Cam Loan
Bardua, Markus
Matz, Mareen
Löhning, Max
Hauser, Anja E.
Kruglov, Andrey
Chang, Hyun‐Dong
Durek, Pawel
Radbruch, Andreas
Mashreghi, Mir-Farzin

DOI
10.1002/eji.201848053
URN
urn:nbn:de:101:1-2022080107132984231335
Rechteinformation
Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.
Letzte Aktualisierung
15.08.2025, 07:30 MESZ

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Beteiligte

  • Addo, Richard K.
  • Heinrich, Frederik
  • Heinz, Gitta Anne
  • Schulz, Daniel
  • Sercan‐Alp, Özen
  • Lehmann, Katrin
  • Tran, Cam Loan
  • Bardua, Markus
  • Matz, Mareen
  • Löhning, Max
  • Hauser, Anja E.
  • Kruglov, Andrey
  • Chang, Hyun‐Dong
  • Durek, Pawel
  • Radbruch, Andreas
  • Mashreghi, Mir-Farzin

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