REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats

to related objects

Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1756-994X

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats ; volume:14 ; number:1 ; day:11 ; month:8 ; year:2022 ; pages:1-10 ; date:12.2022
Genome medicine ; 14, Heft 1 (11.8.2022), 1-10, 12.2022

Creator: Dolzhenko, Egor
Weisburd, Ben
Ibañez, Kristina
Rajan-Babu, Indhu-Shree
Anyansi, Christine
Bennett, Mark F.
Billingsley, Kimberley
Carroll, Ashley
Clamons, Samuel
Danzi, Matt C.
Deshpande, Viraj
Ding, Jinhui
Fazal, Sarah
Halman, Andreas
Jadhav, Bharati
Qiu, Yunjiang
Richmond, Phillip A.
Saunders, Christopher T.
Scheffler, Konrad
Vugt, Joke J. F. A. van
Zwamborn, Ramona R. A. J.
Chong, Samuel S.
Friedman, Jan M.
Tucci, Arianna
Rehm, Heidi L.
Eberle, Michael A.

Contributor: SpringerLink (Online service)

DOI: 10.1186/s13073-022-01085-z

URN: urn:nbn:de:101:1-2022102420104996854976

Rights: Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 15.08.2025, 7:26 AM CEST

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Associated

Dolzhenko, Egor
Weisburd, Ben
Ibañez, Kristina
Rajan-Babu, Indhu-Shree
Anyansi, Christine
Bennett, Mark F.
Billingsley, Kimberley
Carroll, Ashley
Clamons, Samuel
Danzi, Matt C.
Deshpande, Viraj
Ding, Jinhui
Fazal, Sarah
Halman, Andreas
Jadhav, Bharati
Qiu, Yunjiang
Richmond, Phillip A.
Saunders, Christopher T.
Scheffler, Konrad
Vugt, Joke J. F. A. van
Zwamborn, Ramona R. A. J.
Chong, Samuel S.
Friedman, Jan M.
Tucci, Arianna
Rehm, Heidi L.
Eberle, Michael A.
SpringerLink (Online service)

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Haplotype threading: accurate polyploid phasing from long reads

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Transcriptome assembly from long-read RNA-seq alignments with StringTie2

Detecting haplotype-specific transcript variation in long reads with FLAIR2

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libgapmis: extending short-read alignments

Optimal spliced alignments of short sequence reads

Haplotype-aware diplotyping from noisy long reads

Haplotype threading: accurate polyploid phasing from long reads

A reference haplotype panel for genome-wide imputation of short tandem repeats

Transcriptome assembly from long-read RNA-seq alignments with StringTie2

Detecting haplotype-specific transcript variation in long reads with FLAIR2

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CaReAl: capturing read alignments in a BAM file rapidly and conveniently

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REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats

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Other Objects (12)

libgapmis: extending short-read alignments

Optimal spliced alignments of short sequence reads

Haplotype-aware diplotyping from noisy long reads

Haplotype threading: accurate polyploid phasing from long reads

A reference haplotype panel for genome-wide imputation of short tandem repeats

Transcriptome assembly from long-read RNA-seq alignments with StringTie2

Detecting haplotype-specific transcript variation in long reads with FLAIR2

An improved approach for reconstructing consensus repeats from short sequence reads

SAMMate: a GUI tool for processing short read alignments in SAM/BAM format

CaReAl: capturing read alignments in a BAM file rapidly and conveniently

MethPhaser: methylation-based long-read haplotype phasing of human genomes

Haplotype Inference Using Long-Read Nanopore Sequencing: Application to GSTA1 Promoter

libgapmis: extending short-read alignments

Optimal spliced alignments of short sequence reads

Haplotype-aware diplotyping from noisy long reads

Haplotype threading: accurate polyploid phasing from long reads

A reference haplotype panel for genome-wide imputation of short tandem repeats

Transcriptome assembly from long-read RNA-seq alignments with StringTie2

Detecting haplotype-specific transcript variation in long reads with FLAIR2

An improved approach for reconstructing consensus repeats from short sequence reads

SAMMate: a GUI tool for processing short read alignments in SAM/BAM format

CaReAl: capturing read alignments in a BAM file rapidly and conveniently

MethPhaser: methylation-based long-read haplotype phasing of human genomes

Haplotype Inference Using Long-Read Nanopore Sequencing: Application to GSTA1 Promoter

libgapmis: extending short-read alignments

Optimal spliced alignments of short sequence reads

Haplotype-aware diplotyping from noisy long reads

Haplotype threading: accurate polyploid phasing from long reads

A reference haplotype panel for genome-wide imputation of short tandem repeats

Transcriptome assembly from long-read RNA-seq alignments with StringTie2

Detecting haplotype-specific transcript variation in long reads with FLAIR2

An improved approach for reconstructing consensus repeats from short sequence reads

SAMMate: a GUI tool for processing short read alignments in SAM/BAM format

CaReAl: capturing read alignments in a BAM file rapidly and conveniently

MethPhaser: methylation-based long-read haplotype phasing of human genomes

Haplotype Inference Using Long-Read Nanopore Sequencing: Application to GSTA1 Promoter

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