ATAC-seq normalization method can significantly affect differential accessibility analysis and interpretation

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1756-8935

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: ATAC-seq normalization method can significantly affect differential accessibility analysis and interpretation ; volume:13 ; number:1 ; day:22 ; month:4 ; year:2020 ; pages:1-17 ; date:12.2020
Epigenetics & chromatin ; 13, Heft 1 (22.4.2020), 1-17, 12.2020

Classification: Biowissenschaften, Biologie

Creator: Reske, Jake J.
Wilson, Mike R.
Chandler, Ronald L.

Contributor: SpringerLink (Online service)

DOI: 10.1186/s13072-020-00342-y

URN: urn:nbn:de:101:1-2020070400532427749736

Rights: Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 14.08.2025, 11:03 AM CEST

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Reske, Jake J.
Wilson, Mike R.
Chandler, Ronald L.
SpringerLink (Online service)

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An ATAC-seq atlas of chromatin accessibility in mouse tissues

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A scATAC-seq atlas of chromatin accessibility in axolotl brain regions

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txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

scifi-ATAC-seq: massive-scale single-cell chromatin accessibility sequencing using combinatorial fluidic indexing

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ATAC-clock: An aging clock based on chromatin accessibility

scOpen : chromatin-accessibility estimation of single-cell ATAC data

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ATAC-seq normalization method can significantly affect differential accessibility analysis and interpretation

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Other Objects (12)

An ATAC-seq atlas of chromatin accessibility in mouse tissues

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

A scATAC-seq atlas of chromatin accessibility in axolotl brain regions

simATAC: a single-cell ATAC-seq simulation framework

txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

scifi-ATAC-seq: massive-scale single-cell chromatin accessibility sequencing using combinatorial fluidic indexing

ATAC-Seq analysis reveals a widespread decrease of chromatin accessibility in age-related macular degeneration

scNanoATAC-seq: a long-read single-cell ATAC sequencing method to detect chromatin accessibility and genetic variants simultaneously within an individual cell

ATAC-clock: An aging clock based on chromatin accessibility

scOpen : chromatin-accessibility estimation of single-cell ATAC data

Modeling fragment counts improves single-cell ATAC-seq analysis

Identification of transcription factor binding sites using ATAC-seq

An ATAC-seq atlas of chromatin accessibility in mouse tissues

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

A scATAC-seq atlas of chromatin accessibility in axolotl brain regions

simATAC: a single-cell ATAC-seq simulation framework

txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

scifi-ATAC-seq: massive-scale single-cell chromatin accessibility sequencing using combinatorial fluidic indexing

ATAC-Seq analysis reveals a widespread decrease of chromatin accessibility in age-related macular degeneration

scNanoATAC-seq: a long-read single-cell ATAC sequencing method to detect chromatin accessibility and genetic variants simultaneously within an individual cell

ATAC-clock: An aging clock based on chromatin accessibility

scOpen : chromatin-accessibility estimation of single-cell ATAC data

Modeling fragment counts improves single-cell ATAC-seq analysis

Identification of transcription factor binding sites using ATAC-seq

An ATAC-seq atlas of chromatin accessibility in mouse tissues

Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen

A scATAC-seq atlas of chromatin accessibility in axolotl brain regions

simATAC: a single-cell ATAC-seq simulation framework

txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

scifi-ATAC-seq: massive-scale single-cell chromatin accessibility sequencing using combinatorial fluidic indexing

ATAC-Seq analysis reveals a widespread decrease of chromatin accessibility in age-related macular degeneration

scNanoATAC-seq: a long-read single-cell ATAC sequencing method to detect chromatin accessibility and genetic variants simultaneously within an individual cell

ATAC-clock: An aging clock based on chromatin accessibility

scOpen : chromatin-accessibility estimation of single-cell ATAC data

Modeling fragment counts improves single-cell ATAC-seq analysis

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