pycoMeth: a toolbox for differential methylation testing from Nanopore methylation calls

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Location: Deutsche Nationalbibliothek Frankfurt am Main

Extent: Online-Ressource, 1 online resource.

Language: Englisch

Bibliographic citation: pycoMeth: a toolbox for differential methylation testing from Nanopore methylation calls ; volume:24 ; number:1 ; day:20 ; month:4 ; year:2023 ; pages:1-19 ; date:12.2023
Genome biology ; 24, Heft 1 (20.4.2023), 1-19, 12.2023

Creator: Snajder, Rene
Leger, Adrien
Stegle, Oliver
Bonder, Marc Jan

Contributor: SpringerLink (Online service)

DOI: 10.1186/s13059-023-02917-w

URN: urn:nbn:de:101:1-2023083121100454939307

Rights: Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 14.08.2025, 11:00 AM CEST

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Snajder, Rene
Leger, Adrien
Stegle, Oliver
Bonder, Marc Jan
SpringerLink (Online service)

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pycoMeth: a toolbox for differential methylation testing from Nanopore methylation calls

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Other Objects (12)

Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase

PretiMeth: precise prediction models for DNA methylation based on single methylation mark

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis

Simultaneous profiling of histone modifications and DNA methylation via nanopore sequencing

BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation

MethPhaser: methylation-based long-read haplotype phasing of human genomes

Low-pass nanopore sequencing for measurement of global methylation levels in plants

Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

MethMarker: user-friendly design and optimization of gene-specific DNA methylation assays

MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification

A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing

Unraveling the whole genome DNA methylation profile of zebrafish kidney marrow by Oxford Nanopore sequencing

Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase

PretiMeth: precise prediction models for DNA methylation based on single methylation mark

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis

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BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation

MethPhaser: methylation-based long-read haplotype phasing of human genomes

Low-pass nanopore sequencing for measurement of global methylation levels in plants

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MethMarker: user-friendly design and optimization of gene-specific DNA methylation assays

MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification

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Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase

PretiMeth: precise prediction models for DNA methylation based on single methylation mark

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis

Simultaneous profiling of histone modifications and DNA methylation via nanopore sequencing

BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation

MethPhaser: methylation-based long-read haplotype phasing of human genomes

Low-pass nanopore sequencing for measurement of global methylation levels in plants

Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

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MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification

A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing

Unraveling the whole genome DNA methylation profile of zebrafish kidney marrow by Oxford Nanopore sequencing

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