SPLICE-q: a Python tool for genome-wide quantification of splicing efficiency

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2105

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: SPLICE-q: a Python tool for genome-wide quantification of splicing efficiency ; volume:22 ; number:1 ; day:15 ; month:7 ; year:2021 ; pages:1-14 ; date:12.2021
BMC bioinformatics ; 22, Heft 1 (15.7.2021), 1-14, 12.2021

Creator: de Melo Costa, Verônica R.
Pfeuffer, Julianus
Louloupi, Annita
Ørom, Ulf A. V.
Piro, Rosario M.

Contributor: SpringerLink (Online service)

DOI: 10.1186/s12859-021-04282-6

URN: urn:nbn:de:101:1-2021101800242894832055

Rights: Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 15.08.2025, 7:20 AM CEST

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de Melo Costa, Verônica R.
Pfeuffer, Julianus
Louloupi, Annita
Ørom, Ulf A. V.
Piro, Rosario M.
SpringerLink (Online service)

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All reported non-canonical splice site variants in GLA cause aberrant splicing

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SpliceAI-visual: a free online tool to improve SpliceAI splicing variant interpretation

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Benchmarking splice variant prediction algorithms using massively parallel splicing assays

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All reported non-canonical splice site variants in GLA cause aberrant splicing

Modulation of 5' splice site selection using tailed oligonucleotides carrying splicing signals

Systematic analysis of CNGA3 splice variants identifies different mechanisms of aberrant splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

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SPLICE-q: a Python tool for genome-wide quantification of splicing efficiency

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Other Objects (12)

Exact transcript quantification over splice graphs

SpliceAI-visual: a free online tool to improve SpliceAI splicing variant interpretation

Cross-kingdom patterns of alternative splicing and splice recognition

Benchmarking splice variant prediction algorithms using massively parallel splicing assays

SpliceTransformer predicts tissue-specific splicing linked to human diseases

CADD-Splice—improving genome-wide variant effect prediction using deep learning-derived splice scores

SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution

Genome-wide analysis of mutually exclusive splicing

All reported non-canonical splice site variants in GLA cause aberrant splicing

Modulation of 5' splice site selection using tailed oligonucleotides carrying splicing signals

Systematic analysis of CNGA3 splice variants identifies different mechanisms of aberrant splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Exact transcript quantification over splice graphs

SpliceAI-visual: a free online tool to improve SpliceAI splicing variant interpretation

Cross-kingdom patterns of alternative splicing and splice recognition

Benchmarking splice variant prediction algorithms using massively parallel splicing assays

SpliceTransformer predicts tissue-specific splicing linked to human diseases

CADD-Splice—improving genome-wide variant effect prediction using deep learning-derived splice scores

SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution

Genome-wide analysis of mutually exclusive splicing

All reported non-canonical splice site variants in GLA cause aberrant splicing

Modulation of 5' splice site selection using tailed oligonucleotides carrying splicing signals

Systematic analysis of CNGA3 splice variants identifies different mechanisms of aberrant splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

Exact transcript quantification over splice graphs

SpliceAI-visual: a free online tool to improve SpliceAI splicing variant interpretation

Cross-kingdom patterns of alternative splicing and splice recognition

Benchmarking splice variant prediction algorithms using massively parallel splicing assays

SpliceTransformer predicts tissue-specific splicing linked to human diseases

CADD-Splice—improving genome-wide variant effect prediction using deep learning-derived splice scores

SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution

Genome-wide analysis of mutually exclusive splicing

All reported non-canonical splice site variants in GLA cause aberrant splicing

Modulation of 5' splice site selection using tailed oligonucleotides carrying splicing signals

Systematic analysis of CNGA3 splice variants identifies different mechanisms of aberrant splicing

KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data

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