Pathogen detection in RNA-seq data with Pathonoia

to related objects

Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2105

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: Pathogen detection in RNA-seq data with Pathonoia ; volume:24 ; number:1 ; day:17 ; month:2 ; year:2023 ; pages:1-16 ; date:12.2023
BMC bioinformatics ; 24, Heft 1 (17.2.2023), 1-16, 12.2023

Creator: Liebhoff, Anna-Maria
Menden, Kevin
Laschtowitz, Alena
Franke, Andre
Schramm, Christoph
Bonn, Stefan

Contributor: SpringerLink (Online service)

DOI: 10.1186/s12859-023-05144-z

URN: urn:nbn:de:101:1-2023042421121023604229

Rights: Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 14.08.2025, 11:01 AM CEST

Data provider

This object is provided by:
Deutsche Nationalbibliothek. If you have any questions about the object, please contact the data provider.

Show original at data provider

Associated

Liebhoff, Anna-Maria
Menden, Kevin
Laschtowitz, Alena
Franke, Andre
Schramm, Christoph
Bonn, Stefan
SpringerLink (Online service)

Other Objects (12)

Hochschulschrift

Dual RNA-seq of pathogen and host

Resolving host-pathogen interactions by dual RNA-seq

PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data

Impact of RNA degradation on fusion detection by RNA-seq

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Hochschulschrift

Context-based RNA-seq mapping

SeqOthello: querying RNA-seq experiments at scale

Hochschulschrift

Dual RNA-seq of pathogen and host : = Duale RNA-Sequenzierung eines Pathogens und seines Wirts

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

RNA-seq: technical variability and sampling

Transcript quantification with RNA-Seq data

Global and unbiased detection of splice junctions from RNA-seq data

Hochschulschrift

Dual RNA-seq of pathogen and host

Resolving host-pathogen interactions by dual RNA-seq

PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data

Impact of RNA degradation on fusion detection by RNA-seq

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Hochschulschrift

Context-based RNA-seq mapping

SeqOthello: querying RNA-seq experiments at scale

Hochschulschrift

Dual RNA-seq of pathogen and host : = Duale RNA-Sequenzierung eines Pathogens und seines Wirts

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

RNA-seq: technical variability and sampling

Transcript quantification with RNA-Seq data

Global and unbiased detection of splice junctions from RNA-seq data

Hochschulschrift

Dual RNA-seq of pathogen and host

Resolving host-pathogen interactions by dual RNA-seq

PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data

Impact of RNA degradation on fusion detection by RNA-seq

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Hochschulschrift

Context-based RNA-seq mapping

SeqOthello: querying RNA-seq experiments at scale

Hochschulschrift

Dual RNA-seq of pathogen and host : = Duale RNA-Sequenzierung eines Pathogens und seines Wirts

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

RNA-seq: technical variability and sampling

Transcript quantification with RNA-Seq data

Global and unbiased detection of splice junctions from RNA-seq data

Cultural heritage institutions wishing to register will find more information here.

Fields marked * need to be filled in.

Username*

Please enter your username

Email*

Please enter your email address

Please do not fill this field

First name

Last name

Password*

Please enter your password

Confirm password*

Please enter the same password

I have read the terms of use and the privacy policy for the collection of personal data and accept them. *

This field is required.

I would like to subscribe to the newsletter of the Deutsche Digitale Bibliothek. See newsletter subscription info.

Account created

Your "My DDB" account has been successfully created. Before you can log in to your account, you must click the confirmation link in the message we just sent to the email address you provided.

Pathogen detection in RNA-seq data with Pathonoia

Object Details

References and Relationships

Contributors, Places and Time

Further information

Data provider

Associated

Other Objects (12)

Dual RNA-seq of pathogen and host

Resolving host-pathogen interactions by dual RNA-seq

PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data

Impact of RNA degradation on fusion detection by RNA-seq

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Context-based RNA-seq mapping

SeqOthello: querying RNA-seq experiments at scale

Dual RNA-seq of pathogen and host : = Duale RNA-Sequenzierung eines Pathogens und seines Wirts

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

RNA-seq: technical variability and sampling

Transcript quantification with RNA-Seq data

Global and unbiased detection of splice junctions from RNA-seq data

Dual RNA-seq of pathogen and host

Resolving host-pathogen interactions by dual RNA-seq

PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data

Impact of RNA degradation on fusion detection by RNA-seq

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Context-based RNA-seq mapping

SeqOthello: querying RNA-seq experiments at scale

Dual RNA-seq of pathogen and host : = Duale RNA-Sequenzierung eines Pathogens und seines Wirts

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

RNA-seq: technical variability and sampling

Transcript quantification with RNA-Seq data

Global and unbiased detection of splice junctions from RNA-seq data

Dual RNA-seq of pathogen and host

Resolving host-pathogen interactions by dual RNA-seq

PhytoPipe: a phytosanitary pipeline for plant pathogen detection and diagnosis using RNA-seq data

Impact of RNA degradation on fusion detection by RNA-seq

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Context-based RNA-seq mapping

SeqOthello: querying RNA-seq experiments at scale

Dual RNA-seq of pathogen and host : = Duale RNA-Sequenzierung eines Pathogens und seines Wirts

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

RNA-seq: technical variability and sampling

Transcript quantification with RNA-Seq data

Global and unbiased detection of splice junctions from RNA-seq data

Related objects

Reset password