Read mapping on de Bruijn graphs

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2105

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: Read mapping on de Bruijn graphs ; volume:17 ; number:1 ; day:16 ; month:6 ; year:2016 ; pages:1-12 ; date:12.2016
BMC bioinformatics ; 17, Heft 1 (16.6.2016), 1-12, 12.2016

Creator: Limasset, Antoine

Contributor: Cazaux, Bastien
Rivals, Eric
Peterlongo, Pierre
SpringerLink (Online service)

DOI: 10.1186/s12859-016-1103-9

URN: urn:nbn:de:1111-2016061722361

Rights: Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 14.08.2025, 10:46 AM CEST

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Limasset, Antoine
Cazaux, Bastien
Rivals, Eric
Peterlongo, Pierre
SpringerLink (Online service)

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Accelerating read mapping with FastHASH

ESKEMAP: exact sketch-based read mapping

Context-aware seeds for read mapping

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Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery

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mmquant: how to count multi-mapping reads?

Improving read mapping using additional prefix grams

Ariadne: synthetic long read deconvolution using assembly graphs

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Assessing the impact of exact reads on reducing the error rate of read mapping

Accelerating read mapping with FastHASH

ESKEMAP: exact sketch-based read mapping

Context-aware seeds for read mapping

A hybrid short read mapping accelerator

Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery

Using quality scores and longer reads improves accuracy of Solexa read mapping

mmquant: how to count multi-mapping reads?

Improving read mapping using additional prefix grams

Ariadne: synthetic long read deconvolution using assembly graphs

Fast and efficient short read mapping based on a succinct hash index

Let's read on

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Read mapping on de Bruijn graphs

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Other Objects (12)

Assessing the impact of exact reads on reducing the error rate of read mapping

Accelerating read mapping with FastHASH

ESKEMAP: exact sketch-based read mapping

Context-aware seeds for read mapping

A hybrid short read mapping accelerator

Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery

Using quality scores and longer reads improves accuracy of Solexa read mapping

mmquant: how to count multi-mapping reads?

Improving read mapping using additional prefix grams

Ariadne: synthetic long read deconvolution using assembly graphs

Fast and efficient short read mapping based on a succinct hash index

Let's read on

Assessing the impact of exact reads on reducing the error rate of read mapping

Accelerating read mapping with FastHASH

ESKEMAP: exact sketch-based read mapping

Context-aware seeds for read mapping

A hybrid short read mapping accelerator

Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery

Using quality scores and longer reads improves accuracy of Solexa read mapping

mmquant: how to count multi-mapping reads?

Improving read mapping using additional prefix grams

Ariadne: synthetic long read deconvolution using assembly graphs

Fast and efficient short read mapping based on a succinct hash index

Let's read on

Assessing the impact of exact reads on reducing the error rate of read mapping

Accelerating read mapping with FastHASH

ESKEMAP: exact sketch-based read mapping

Context-aware seeds for read mapping

A hybrid short read mapping accelerator

Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery

Using quality scores and longer reads improves accuracy of Solexa read mapping

mmquant: how to count multi-mapping reads?

Improving read mapping using additional prefix grams

Ariadne: synthetic long read deconvolution using assembly graphs

Fast and efficient short read mapping based on a succinct hash index

Let's read on

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