Comparing a few SNP calling algorithms using low-coverage sequencing data

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Location: Deutsche Nationalbibliothek Frankfurt am Main

ISSN: 1471-2105

Extent: Online-Ressource

Language: Englisch

Notes: online resource.

Bibliographic citation: Comparing a few SNP calling algorithms using low-coverage sequencing data ; volume:14 ; number:1 ; day:17 ; month:9 ; year:2013 ; pages:1-15 ; date:12.2013
BMC bioinformatics ; 14, Heft 1 (17.9.2013), 1-15, 12.2013

Creator: Yu, Xiaoqing

Contributor: Sun, Shuying
SpringerLink (Online service)

DOI: 10.1186/1471-2105-14-274

URN: urn:nbn:de:1111-2016021738667

Rights: Der Zugriff auf das Objekt ist unbeschränkt möglich.

Last update: 15.08.2025, 7:26 AM CEST

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Yu, Xiaoqing
Sun, Shuying
SpringerLink (Online service)

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Comparing a few SNP calling algorithms using low-coverage sequencing data

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Other Objects (12)

SNP calling by sequencing pooled samples

Bis-SNP: Combined DNA methylation and SNP calling for Bisulfite-seq data

A secure SNP panel scheme using homomorphically encrypted K-mers without SNP calling on the user side

Improving mapping and SNP-calling performance in multiplexed targeted next-generation sequencing

Duet: SNP-assisted structural variant calling and phasing using Oxford nanopore sequencing

Evaluation of SNP calling using single and multiple-sample calling algorithms by validation against array base genotyping and Mendelian inheritance

Linkage disequilibrium based genotype calling from low-coverage shotgun sequencing reads

Steps to ensure accuracy in genotype and SNP calling from Illumina sequencing data

SNiPer: Improved SNP genotype calling for Affymetrix 10K GeneChip microarray data

SNP allele calling of Illumina Infinium Omni5-4 data using the butterfly method

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SNP calling by sequencing pooled samples

Bis-SNP: Combined DNA methylation and SNP calling for Bisulfite-seq data

A secure SNP panel scheme using homomorphically encrypted K-mers without SNP calling on the user side

Improving mapping and SNP-calling performance in multiplexed targeted next-generation sequencing

Duet: SNP-assisted structural variant calling and phasing using Oxford nanopore sequencing

Evaluation of SNP calling using single and multiple-sample calling algorithms by validation against array base genotyping and Mendelian inheritance

Linkage disequilibrium based genotype calling from low-coverage shotgun sequencing reads

Steps to ensure accuracy in genotype and SNP calling from Illumina sequencing data

SNiPer: Improved SNP genotype calling for Affymetrix 10K GeneChip microarray data

SNP allele calling of Illumina Infinium Omni5-4 data using the butterfly method

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Generation of SNP datasets for orangutan population genomics using improved reduced-representation sequencing and direct comparisons of SNP calling algorithms

SNP calling by sequencing pooled samples

Bis-SNP: Combined DNA methylation and SNP calling for Bisulfite-seq data

A secure SNP panel scheme using homomorphically encrypted K-mers without SNP calling on the user side

Improving mapping and SNP-calling performance in multiplexed targeted next-generation sequencing

Duet: SNP-assisted structural variant calling and phasing using Oxford nanopore sequencing

Evaluation of SNP calling using single and multiple-sample calling algorithms by validation against array base genotyping and Mendelian inheritance

Linkage disequilibrium based genotype calling from low-coverage shotgun sequencing reads

Steps to ensure accuracy in genotype and SNP calling from Illumina sequencing data

SNiPer: Improved SNP genotype calling for Affymetrix 10K GeneChip microarray data

SNP allele calling of Illumina Infinium Omni5-4 data using the butterfly method

Spatial normalization improves the quality of genotype calling for Affymetrix SNP 6.0 arrays

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