The Weighted Mean Curvature Derivative of a Space-Filling Diagram

Abstract: Representing an atom by a solid sphere in 3-dimensional Euclidean space, we get the space-filling diagram of a molecule by taking the union. Molecular dynamics simulates its motion subject to bonds and other forces, including the solvation free energy. The morphometric approach [12, 17] writes the latter as a linear combination of weighted versions of the volume, area, mean curvature, and Gaussian curvature of the space-filling diagram. We give a formula for the derivative of the weighted mean curvature. Together with the derivatives of the weighted volume in [7], the weighted area in [3], and the weighted Gaussian curvature [1], this yields the derivative of the morphometric expression of the solvation free energy.

Standort
Deutsche Nationalbibliothek Frankfurt am Main
Umfang
Online-Ressource
Sprache
Englisch

Erschienen in
The Weighted Mean Curvature Derivative of a Space-Filling Diagram ; volume:8 ; number:1 ; year:2020 ; pages:51-67 ; extent:17
Computational and mathematical biophysics ; 8, Heft 1 (2020), 51-67 (gesamt 17)

Urheber
Akopyan, Arsenyi
Edelsbrunner, Herbert

DOI
10.1515/cmb-2020-0100
URN
urn:nbn:de:101:1-2410261649054.906517184716
Rechteinformation
Open Access; Der Zugriff auf das Objekt ist unbeschränkt möglich.
Letzte Aktualisierung
15.08.2025, 07:31 MESZ

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Beteiligte

  • Akopyan, Arsenyi
  • Edelsbrunner, Herbert

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